Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855985.1_cds_XP_016513006.1_25589
CDS Infomation

[gene=LOC107830039] [db_xref=GeneID:107830039] [protein=translation initiation factor eIF-2B subunit epsilon-like] [protein_id=XP_016513006.1] [location=join(2517..2666,2965..3195,7763..8074,8546..8653,10813..11002,11646..11908,12776..12905,14298..14368,16407..16664,16754..16830,19649..19740,20419..20501,20961..21032,23572..23697,23970..24008)] [gbkey=CDS]
Sequence

ATGGTGGCAAAGAAAGGAGGAAGCAAAGGAGGAGGAATGGGGGGAGCAGATGATGCTGAA
GAGGAATTGGCTCGTACCCCGTTGCAGGCTATTGTTTTGGCCGATAGTTTCACCACTAAG
TTCCGACCCATCACTCTTGAACGTCCCAAAGTACTGCTACCATTGGTGAATGCCCCTATG
ATAGATTATACCTTGGCATGGCTTGAATCAGCTGGTGTGGAAGAAGTTTTTGTTTTCTGT
TCTGCTCATTCTAAGCAAGTGATTGATTATTTGGATAACTCCAATTGGTTTGCCCAACCA
AACTTTTCAGTCACAACGATTGAATCACACAATGCTATTAGTGCTGGAGATGCTTTGCGC
TCCATCTATGAGCAACATGTGATACGCGGTGATTTTATCCTCGTCAGTGGAGATACTGTG
AGCAACATGTCACTCTCACAGGCACTTAAGGAACATAAGGAGAGACGAAGAAAGGATAGT
AATGCTGTAATGACCATGGTGATTAAACAATCAAAGCCTTCACCTATAACTCGCCAATCT
CGTCTTGGAACTGAAGAGCTGTTCATGGTAATTGATCCAGAGAGTAAGCAGCTGCTGTAT
TATGAAGACAGGGGAGATAATTTAAAAGGATATTTGTCTCTTGATAAGGCATTGCTTACT
GATACATCCATTTCCCTTCAGAATGACAAGCAGGATTGTTACATTGACATCTGCTCCCCA
GAAGTTTTAAGTCTTTTCACTGATAATTTTGACTATCAACATTTGCGGCGTGATTTTGTC
AAGGGGTTGCTCGTCGATGATATTATGGGTTATAAAATCTACACCCATGAAATTCATTCA
AGTTATGCGGCAAGAATTGATAACTATAGAAGTTATGACACCATTAGCAAGGACATAATT
CAGAGATGGACATATCCCTTGGTGCCTGATGTCCATTTTTTTGGAAATTCTGCTACTAAA
TTGGAAAGGCAGGGCATGTATCGAGCACCTGAAATTAAGCAATCCCGCTCAGCGAAAATC
GGTCCCTTTACTGTAATTGGAACTGGAACCAGTATTGGGAACAACACAGAGATTTCAAAC
TCAGTTGTTGGGGAAGGTTGCTCAATTGGGTCAAATGTCACAATTGAAGGTTGCTATATA
TGGCATAACGTTACGATTGAAGATGGCTGCAAATTGAAGCACTCAATAGTTTGTGACGGT
GTGACAATGAAGTCTGGAGCAGCTTTAGAGCCTGGTGTTGTCTTGTCTTTTAAGGTTGTG
ATTGGCAGGAATTTCCTTGTACCTGCTTACTCCAAGGTATCTTTGCTTCAGCAACCTATA
AAGCAAGATAGTGACGAGGAACTGGAATATGCTGACAATAGTAGTGGGATAACTGAAGTT
CCATCTATCTCTGGTACTTTGGATGAGTTGAAGGAGGAAGAGAGGACCGAGTTACCTGAC
TCGCAAGAGTATGAGGTTGGTGATGGTGGAGTAGGTTTCATATGGTTAGTCAGTGAGGGT
GGGCAGGAAGAAGAATGGAGACATTCTGTTGCACCAATTCCTGTGGATAAACTTGTTGGG
ATCATGCAAATAACTAATGATGAAGCAGATATATCAAATGAAGATGGTGCCTTTCTTCCA
CCTTCCGGAGAACTGGGACCTGACTCTATCACTAATGATTCTAATGAAGATGGTGAAGAC
ACTAGAGATGACTCTGTAATTTTTGAGAGAGAAGTTGAAGCAACTTTTCAAAGGGCTGTA
GAGGAAGAAGTAACAGAAGACCATGTAATTTTAGAAGTTAATGCATTGCGGTTGTCATAC
AATATGACATCTGCAGACTGTGCTGGTGCCTTGTTTTATTCAGTGATGAAATTGGCATTG
GATGCTCCGCACGACTCACCTATTGAATTGGTCAAGAATGTTGCTACCGCAGTTAAAAAA
TGGAAAAAACTTCTGAAATATTACTTGCCAAGCATTGATGAAGAGATTGAAGTAATATTG
AAGTTTGAAGAAATGTGCTTGGAGTCTGCAAAGGAGTTTTCTCCATTATTTGTACAGGTT
TTGCATCATCTGTACGATCAGGACATTATACAAGAAGAAGCAATACTTGACTGGGCTTCT
GAAAAGGAAGAAGCAGAGGAGTCAGATAAGGTTTTTGTCAAGCAATCGGAAAAATTTATC
CAGTGGCTCAAAGAAGCATCTGAAGAAGAGGATGAGGACTGA

Peptide Sequence

PEP ID

XP_016513006.1
PEP Infomation

PREDICTED: translation initiation factor eIF-2B subunit epsilon-like [Nicotiana tabacum]
Sequence

MVAKKGGSKGGGMGGADDAEEELARTPLQAIVLADSFTTKFRPITLERPKVLLPLVNAPM
IDYTLAWLESAGVEEVFVFCSAHSKQVIDYLDNSNWFAQPNFSVTTIESHNAISAGDALR
SIYEQHVIRGDFILVSGDTVSNMSLSQALKEHKERRRKDSNAVMTMVIKQSKPSPITRQS
RLGTEELFMVIDPESKQLLYYEDRGDNLKGYLSLDKALLTDTSISLQNDKQDCYIDICSP
EVLSLFTDNFDYQHLRRDFVKGLLVDDIMGYKIYTHEIHSSYAARIDNYRSYDTISKDII
QRWTYPLVPDVHFFGNSATKLERQGMYRAPEIKQSRSAKIGPFTVIGTGTSIGNNTEISN
SVVGEGCSIGSNVTIEGCYIWHNVTIEDGCKLKHSIVCDGVTMKSGAALEPGVVLSFKVV
IGRNFLVPAYSKVSLLQQPIKQDSDEELEYADNSSGITEVPSISGTLDELKEEERTELPD
SQEYEVGDGGVGFIWLVSEGGQEEEWRHSVAPIPVDKLVGIMQITNDEADISNEDGAFLP
PSGELGPDSITNDSNEDGEDTRDDSVIFEREVEATFQRAVEEEVTEDHVILEVNALRLSY
NMTSADCAGALFYSVMKLALDAPHDSPIELVKNVATAVKKWKKLLKYYLPSIDEEIEVIL
KFEEMCLESAKEFSPLFVQVLHHLYDQDIIQEEAILDWASEKEEAEESDKVFVKQSEKFI
QWLKEASEEEDED

Transcript Sequence

Gene sequence data has not been registered.